Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Cell Cycle (GO:0007049) Genes Targeted by hsa-mir-548d-3p in END Ovarian Hendrix Cluster 32 Table contains all genes in the END Ovarian Hendrix cluster number 32. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-548d-3p GO:0007049 9581 PREPL prolyl endopeptidase-like [Source:HGNC Symbol;Acc:30228] zzz999 6334 SCN8A sodium channel, voltage gated, type VIII, alpha subunit [Source:HGNC Symbol;Acc:10596] zzz999 4190 MDH1 malate dehydrogenase 1, NAD (soluble) [Source:HGNC Symbol;Acc:6970] zzz999 7531 YWHAE tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide [Source:HGNC Symbol;Acc:12851] T Yes 1398 CRK v-crk sarcoma virus CT10 oncogene homolog (avian) [Source:HGNC Symbol;Acc:2362] zzz999 5830 PEX5 peroxisomal biogenesis factor 5 [Source:HGNC Symbol;Acc:9719] zzz999 8289 ARID1A AT rich interactive domain 1A (SWI-like) [Source:HGNC Symbol;Acc:11110] P T 23039 XPO7 exportin 7 [Source:HGNC Symbol;Acc:14108] zzz999 55972 SLC25A40 solute carrier family 25, member 40 [Source:HGNC Symbol;Acc:29680] zzz999 6734 SRPR signal recognition particle receptor (docking protein) [Source:HGNC Symbol;Acc:11307] zzz999 11224 RPL35 ribosomal protein L35 [Source:HGNC Symbol;Acc:10344] zzz999 1027 CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) [Source:HGNC Symbol;Acc:1785] P T Yes 3761 KCNJ4 potassium inwardly-rectifying channel, subfamily J, member 4 [Source:HGNC Symbol;Acc:6265] zzz999 1174 AP1S1 adaptor-related protein complex 1, sigma 1 subunit [Source:HGNC Symbol;Acc:559] zzz999 64689 GORASP1 golgi reassembly stacking protein 1, 65kDa [Source:HGNC Symbol;Acc:16769] zzz999 Yes 80143 SIKE1 suppressor of IKBKE 1 [Source:HGNC Symbol;Acc:26119] T 10575 CCT4 chaperonin containing TCP1, subunit 4 (delta) [Source:HGNC Symbol;Acc:1617] zzz999 50809 HP1BP3 heterochromatin protein 1, binding protein 3 [Source:HGNC Symbol;Acc:24973] T 10672 GNA13 guanine nucleotide binding protein (G protein), alpha 13 [Source:HGNC Symbol;Acc:4381] zzz999 219 ALDH1B1 aldehyde dehydrogenase 1 family, member B1 [Source:HGNC Symbol;Acc:407] zzz999 5994 RFXAP regulatory factor X-associated protein [Source:HGNC Symbol;Acc:9988] T 145781 GCOM1 GRINL1A complex locus protein 1 [Source:UniProtKB/Swiss-Prot;Acc:P0CAP1] T 5719 PSMD13 proteasome (prosome, macropain) 26S subunit, non-ATPase, 13 [Source:HGNC Symbol;Acc:9558] zzz999 Yes 8976 WASL Wiskott-Aldrich syndrome-like [Source:HGNC Symbol;Acc:12735] T 79038 ZFYVE21 zinc finger, FYVE domain containing 21 [Source:HGNC Symbol;Acc:20760] zzz999 8899 PRPF4B PRP4 pre-mRNA processing factor 4 homolog B (yeast) [Source:HGNC Symbol;Acc:17346] T 4150 MAZ MYC-associated zinc finger protein (purine-binding transcription factor) [Source:HGNC Symbol;Acc:6914] zzz999 6428 SRSF3 serine/arginine-rich splicing factor 3 [Source:HGNC Symbol;Acc:10785] T 51715 RAB23 RAB23, member RAS oncogene family [Source:HGNC Symbol;Acc:14263] T 11051 NUDT21 nudix (nucleoside diphosphate linked moiety X)-type motif 21 [Source:HGNC Symbol;Acc:13870] T 9230 RAB11B RAB11B, member RAS oncogene family [Source:HGNC Symbol;Acc:9761] zzz999 Yes 9908 G3BP2 GTPase activating protein (SH3 domain) binding protein 2 [Source:HGNC Symbol;Acc:30291] zzz999 4799 NFX1 nuclear transcription factor, X-box binding 1 [Source:HGNC Symbol;Acc:7803] zzz999 200734 SPRED2 sprouty-related, EVH1 domain containing 2 [Source:HGNC Symbol;Acc:17722] zzz999 5631 PRPS1 phosphoribosyl pyrophosphate synthetase 1 [Source:HGNC Symbol;Acc:9462] zzz999 29967 LRP12 low density lipoprotein receptor-related protein 12 [Source:HGNC Symbol;Acc:31708] T 55334 SLC39A9 solute carrier family 39 (zinc transporter), member 9 [Source:HGNC Symbol;Acc:20182] zzz999 23473 CAPN7 calpain 7 [Source:HGNC Symbol;Acc:1484] T 55327 LIN7C lin-7 homolog C (C. elegans) [Source:HGNC Symbol;Acc:17789] T 9589 WTAP Wilms tumor 1 associated protein [Source:HGNC Symbol;Acc:16846] zzz999 Yes 25932 CLIC4 chloride intracellular channel 4 [Source:HGNC Symbol;Acc:13518] T 4928 NUP98 nucleoporin 98kDa [Source:HGNC Symbol;Acc:8068] P T Yes 5695 PSMB7 proteasome (prosome, macropain) subunit, beta type, 7 [Source:HGNC Symbol;Acc:9544] zzz999 Yes 5928 RBBP4 retinoblastoma binding protein 4 [Source:HGNC Symbol;Acc:9887] T Yes 57684 ZBTB26 zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:23383] zzz999 27436 EML4 echinoderm microtubule associated protein like 4 [Source:HGNC Symbol;Acc:1316] T Yes 10920 COPS8 COP9 constitutive photomorphogenic homolog subunit 8 (Arabidopsis) [Source:HGNC Symbol;Acc:24335] zzz999 5573 PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) [Source:HGNC Symbol;Acc:9388] T 59343 SENP2 SUMO1/sentrin/SMT3 specific peptidase 2 [Source:HGNC Symbol;Acc:23116] zzz999 2752 GLUL glutamate-ammonia ligase [Source:HGNC Symbol;Acc:4341] T 124801 LSM12 LSM12 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:26407] T 4947 OAZ2 ornithine decarboxylase antizyme 2 [Source:HGNC Symbol;Acc:8096] zzz999 83941 TM2D1 TM2 domain containing 1 [Source:HGNC Symbol;Acc:24142] T 10049 DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6 [Source:HGNC Symbol;Acc:14888] T 4144 MAT2A methionine adenosyltransferase II, alpha [Source:HGNC Symbol;Acc:6904] zzz999 6773 STAT2 signal transducer and activator of transcription 2, 113kDa [Source:HGNC Symbol;Acc:11363] T 79673 ZNF329 zinc finger protein 329 [Source:HGNC Symbol;Acc:14209] zzz999 93487 MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like [Source:HGNC Symbol;Acc:19840] T 10239 AP3S2 adaptor-related protein complex 3, sigma 2 subunit [Source:HGNC Symbol;Acc:571] T 10526 IPO8 importin 8 [Source:HGNC Symbol;Acc:9853] P T 57446 NDRG3 NDRG family member 3 [Source:HGNC Symbol;Acc:14462] T 56681 SAR1A SAR1 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:10534] T 2309 FOXO3 forkhead box O3 [Source:HGNC Symbol;Acc:3821] T 8467 SMARCA5 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:HGNC Symbol;Acc:11101] zzz999 4926 NUMA1 nuclear mitotic apparatus protein 1 [Source:HGNC Symbol;Acc:8059] P T Yes 6782 HSPA13 heat shock protein 70kDa family, member 13 [Source:HGNC Symbol;Acc:11375] zzz999 8886 DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 [Source:HGNC Symbol;Acc:2741] T 5962 RDX radixin [Source:HGNC Symbol;Acc:9944] zzz999 162972 zzz999 Zinc finger protein 550 [Source:UniProtKB/Swiss-Prot;Acc:Q7Z398] zzz999 1017 CDK2 cyclin-dependent kinase 2 [Source:HGNC Symbol;Acc:1771] zzz999 Yes 11080 DNAJB4 DnaJ (Hsp40) homolog, subfamily B, member 4 [Source:HGNC Symbol;Acc:14886] T 8411 EEA1 early endosome antigen 1 [Source:HGNC Symbol;Acc:3185] P T 10114 HIPK3 homeodomain interacting protein kinase 3 [Source:HGNC Symbol;Acc:4915] zzz999 11017 SNRNP27 small nuclear ribonucleoprotein 27kDa (U4/U6.U5) [Source:HGNC Symbol;Acc:30240] zzz999 11258 DCTN3 dynactin 3 (p22) [Source:HGNC Symbol;Acc:2713] zzz999 Yes 10574 CCT7 chaperonin containing TCP1, subunit 7 (eta) [Source:HGNC Symbol;Acc:1622] zzz999 8621 CDK13 cyclin-dependent kinase 13 [Source:HGNC Symbol;Acc:1733] zzz999 Yes 23118 TAB2 TGF-beta activated kinase 1/MAP3K7 binding protein 2 [Source:HGNC Symbol;Acc:17075] T 23404 EXOSC2 exosome component 2 [Source:HGNC Symbol;Acc:17097] zzz999 54472 TOLLIP toll interacting protein [Source:HGNC Symbol;Acc:16476] T 27291 C10orf28 chromosome 10 open reading frame 28 [Source:HGNC Symbol;Acc:23512] zzz999 26515 FXC1 fracture callus 1 homolog (rat) [Source:HGNC Symbol;Acc:4022] T 7745 ZNF192 zinc finger protein 192 [Source:HGNC Symbol;Acc:12983] zzz999 11163 NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4 [Source:HGNC Symbol;Acc:8051] zzz999 6683 SPAST spastin [Source:HGNC Symbol;Acc:11233] T Yes 27336 HTATSF1 HIV-1 Tat specific factor 1 [Source:HGNC Symbol;Acc:5276] zzz999 55755 CDK5RAP2 CDK5 regulatory subunit associated protein 2 [Source:HGNC Symbol;Acc:18672] zzz999 Yes 51077 FCF1 FCF1 small subunit (SSU) processome component homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20220] zzz999 7046 TGFBR1 transforming growth factor, beta receptor 1 [Source:HGNC Symbol;Acc:11772] T 27065 zzz999 Neuron-specific protein family member 1 [Source:UniProtKB/Swiss-Prot;Acc:P42857] T 5781 PTPN11 protein tyrosine phosphatase, non-receptor type 11 [Source:HGNC Symbol;Acc:9644] T Yes 1654 DDX3X DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, X-linked [Source:HGNC Symbol;Acc:2745] P T 7862 BRPF1 bromodomain and PHD finger containing, 1 [Source:HGNC Symbol;Acc:14255] zzz999 9412 MED21 mediator complex subunit 21 [Source:HGNC Symbol;Acc:11473] zzz999 29058 C20orf30 chromosome 20 open reading frame 30 [Source:HGNC Symbol;Acc:15876] zzz999 6638 SNRPN small nuclear ribonucleoprotein polypeptide N [Source:HGNC Symbol;Acc:11164] zzz999 4088 SMAD3 SMAD family member 3 [Source:HGNC Symbol;Acc:6769] T Yes 208 AKT2 v-akt murine thymoma viral oncogene homolog 2 [Source:HGNC Symbol;Acc:392] T 1629 DBT dihydrolipoamide branched chain transacylase E2 [Source:HGNC Symbol;Acc:2698] T 6118 RPA2 replication protein A2, 32kDa [Source:HGNC Symbol;Acc:10290] zzz999 Yes 5594 MAPK1 mitogen-activated protein kinase 1 [Source:HGNC Symbol;Acc:6871] T Yes 1266 CNN3 calponin 3, acidic [Source:HGNC Symbol;Acc:2157] T 8125 ANP32A acidic (leucine-rich) nuclear phosphoprotein 32 family, member A [Source:HGNC Symbol;Acc:13233] T 10558 SPTLC1 serine palmitoyltransferase, long chain base subunit 1 [Source:HGNC Symbol;Acc:11277] zzz999 9043 SPAG9 sperm associated antigen 9 [Source:HGNC Symbol;Acc:14524] zzz999 5868 RAB5A RAB5A, member RAS oncogene family [Source:HGNC Symbol;Acc:9783] T 26084 ARHGEF26 Rho guanine nucleotide exchange factor (GEF) 26 [Source:HGNC Symbol;Acc:24490] T 9927 MFN2 mitofusin 2 [Source:HGNC Symbol;Acc:16877] T Yes 6117 RPA1 replication protein A1, 70kDa [Source:HGNC Symbol;Acc:10289] T Yes 2799 GNS glucosamine (N-acetyl)-6-sulfatase [Source:HGNC Symbol;Acc:4422] T 80007 C10orf88 chromosome 10 open reading frame 88 [Source:HGNC Symbol;Acc:25822] T 84656 GLYR1 glyoxylate reductase 1 homolog (Arabidopsis) [Source:HGNC Symbol;Acc:24434] T 7520 XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining) [Source:HGNC Symbol;Acc:12833] zzz999 6655 SOS2 son of sevenless homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:11188] T 10289 EIF1B eukaryotic translation initiation factor 1B [Source:HGNC Symbol;Acc:30792] zzz999 51616 TAF9B TAF9B RNA polymerase II, TATA box binding protein (TBP)-associated factor, 31kDa [Source:HGNC Symbol;Acc:17306] T 55283 MCOLN3 mucolipin 3 [Source:HGNC Symbol;Acc:13358] T 55787 TXLNG taxilin gamma [Source:HGNC Symbol;Acc:18578] zzz999 Yes 80067 DCAF17 DDB1 and CUL4 associated factor 17 [Source:HGNC Symbol;Acc:25784] T 2002 ELK1 ELK1, member of ETS oncogene family [Source:HGNC Symbol;Acc:3321] P T 55968 NSFL1C NSFL1 (p97) cofactor (p47) [Source:HGNC Symbol;Acc:15912] P T 8450 CUL4B cullin 4B [Source:HGNC Symbol;Acc:2555] T Yes 23190 UBXN4 UBX domain protein 4 [Source:HGNC Symbol;Acc:14860] T 3187 HNRNPH1 heterogeneous nuclear ribonucleoprotein H1 (H) [Source:HGNC Symbol;Acc:5041] zzz999 5571 PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit [Source:HGNC Symbol;Acc:9385] zzz999 Yes 4836 NMT1 N-myristoyltransferase 1 [Source:HGNC Symbol;Acc:7857] zzz999 10484 SEC23A Sec23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:10701] T 57172 CAMK1G calcium/calmodulin-dependent protein kinase IG [Source:HGNC Symbol;Acc:14585] zzz999 901 CCNG2 cyclin G2 [Source:HGNC Symbol;Acc:1593] zzz999 Yes 79692 ZNF322A zinc finger protein 322A [Source:HGNC Symbol;Acc:23640] T 9364 RAB28 RAB28, member RAS oncogene family [Source:HGNC Symbol;Acc:9768] zzz999 6868 ADAM17 ADAM metallopeptidase domain 17 [Source:HGNC Symbol;Acc:195] T Yes 5660 PSAP prosaposin [Source:HGNC Symbol;Acc:9498] T 10116 FEM1B fem-1 homolog b (C. elegans) [Source:HGNC Symbol;Acc:3649] zzz999 Yes 5019 OXCT1 3-oxoacid CoA transferase 1 [Source:HGNC Symbol;Acc:8527] T 113419 TEX261 testis expressed 261 [Source:HGNC Symbol;Acc:30712] T 11196 SEC23IP SEC23 interacting protein [Source:HGNC Symbol;Acc:17018] T 23291 FBXW11 F-box and WD repeat domain containing 11 [Source:HGNC Symbol;Acc:13607] T Yes 55188 RIC8B resistance to inhibitors of cholinesterase 8 homolog B (C. elegans) [Source:HGNC Symbol;Acc:25555] T 1982 EIF4G2 eukaryotic translation initiation factor 4 gamma, 2 [Source:HGNC Symbol;Acc:3297] P T Yes 8496 PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1) [Source:HGNC Symbol;Acc:9249] T 23062 GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2 [Source:HGNC Symbol;Acc:16064] zzz999 4047 LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:HGNC Symbol;Acc:6708] T 6478 SIAH2 seven in absentia homolog 2 (Drosophila) [Source:HGNC Symbol;Acc:10858] P T Yes 10314 LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial) [Source:HGNC Symbol;Acc:6508] T 5082 PDCL phosducin-like [Source:HGNC Symbol;Acc:8770] T 79726 WDR59 WD repeat domain 59 [Source:HGNC Symbol;Acc:25706] zzz999 79001 VKORC1 vitamin K epoxide reductase complex, subunit 1 [Source:HGNC Symbol;Acc:23663] zzz999 4149 MAX MYC associated factor X [Source:HGNC Symbol;Acc:6913] T 55683 KIAA1310 KIAA1310 [Source:HGNC Symbol;Acc:25473] T 444 ASPH aspartate beta-hydroxylase [Source:HGNC Symbol;Acc:757] zzz999 24148 PRPF6 PRP6 pre-mRNA processing factor 6 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:15860] T 25972 UNC50 unc-50 homolog (C. elegans) [Source:HGNC Symbol;Acc:16046] zzz999 25977 NECAP1 NECAP endocytosis associated 1 [Source:HGNC Symbol;Acc:24539] T 4901 NRL neural retina leucine zipper [Source:HGNC Symbol;Acc:8002] T 26058 GIGYF2 GRB10 interacting GYF protein 2 [Source:HGNC Symbol;Acc:11960] T 10801 SEPT9 septin 9 [Source:HGNC Symbol;Acc:7323] zzz999 Yes 9191 DEDD death effector domain containing [Source:HGNC Symbol;Acc:2755] zzz999 7693 ZNF134 zinc finger protein 134 [Source:HGNC Symbol;Acc:12918] T 9440 MED17 mediator complex subunit 17 [Source:HGNC Symbol;Acc:2375] T 9736 USP34 ubiquitin specific peptidase 34 [Source:HGNC Symbol;Acc:20066] zzz999 1979 EIF4EBP2 eukaryotic translation initiation factor 4E binding protein 2 [Source:HGNC Symbol;Acc:3289] T 2581 GALC galactosylceramidase [Source:HGNC Symbol;Acc:4115] zzz999 865 CBFB core-binding factor, beta subunit [Source:HGNC Symbol;Acc:1539] P T 7360 UGP2 UDP-glucose pyrophosphorylase 2 [Source:HGNC Symbol;Acc:12527] zzz999 3840 KPNA4 karyopherin alpha 4 (importin alpha 3) [Source:HGNC Symbol;Acc:6397] P T 25913 POT1 protection of telomeres 1 homolog (S. pombe) [Source:HGNC Symbol;Acc:17284] zzz999 405 ARNT aryl hydrocarbon receptor nuclear translocator [Source:HGNC Symbol;Acc:700] T 554313 HIST2H4B histone cluster 2, H4b [Source:HGNC Symbol;Acc:29607] zzz999 6434 TRA2B transformer 2 beta homolog (Drosophila) [Source:HGNC Symbol;Acc:10781] P T 2956 MSH6 mutS homolog 6 (E. coli) [Source:HGNC Symbol;Acc:7329] zzz999 Yes 1386 ATF2 activating transcription factor 2 [Source:HGNC Symbol;Acc:784] P T 10818 FRS2 fibroblast growth factor receptor substrate 2 [Source:HGNC Symbol;Acc:16971] T

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